Tisch comp-genomics.org
Web"You did a great service to the cancer research community and by that to the patients that donated the samples!."--Clinical pathologist, Karolinska University Hospital WebMay 28, 2024 · BackgroundCD8+ T cells work as a key effector of adaptive immunity and are closely associated with immune response for killing tumor cells. It is crucial to understand …
Tisch comp-genomics.org
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WebNov 16, 2024 · TISCH provides interactive gene expression visualization across multiple datasets at the single-cell level or cluster level, allowing systematic comparison between different cell-types, patients, tissue origins, treatment and response groups, and even different cancer-types. WebTumor Immune Single-cell Hub (TISCH) is a scRNA-seq database, which aims to characterize tumor microenvironment at single-cell resolution. Data collection and processing We collected tumor-related scRNA-seq studies from human and mouse. Besides datasets of treatment-naive patients, those with samples treated are also included.
WebMar 7, 2024 · TISCH is a scRNA-seq database focused on the tumor microenvironment (TME). TISCH provides detailed at the single cell level annotation of cell types, allowing one to explore TME in different cancer types . In this dataset, there are three main cell types, including immune cells, stromal cells, and malignant cells. WebCluster Celltype (malignancy) Celltype (major-lineage) Celltype (minor-lineage) Gene Log2 FC Percentage (%) Adjusted p-value
http://tisch1.comp-genomics.org/documentation/ WebMay 28, 2024 · BackgroundCD8+ T cells work as a key effector of adaptive immunity and are closely associated with immune response for killing tumor cells. It is crucial to understand the role of tumor-infiltrating CD8+ T cells in uveal melanoma (UM) to predict the prognosis and response to immunotherapy.Materials and MethodsSingle-cell transcriptomes of UM …
WebNov 2, 2024 · TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment Nucleic Acids Research Oxford Academic Abstract. The Tumor Immune Single Cell Hub 2 (TISCH2) is a resource of single-cell RNA-seq (scRNA-seq) data from human and mouse tumors, which enables comprehen Skip to …
WebNov 12, 2024 · Here, we present Tumor Immune Single Cell Hub (TISCH, http://tisch.comp-genomics.org ), a large-scale curated database that integrates single-cell transcriptomic … lakehead bursariesWebTumor Immune Single-cell Hub 2 (TISCH2) is a scRNA-seq database focusing on tumor microenvironment (TME). TISCH2 provides detailed cell-type annotation at the single-cell … Dataset Browser. Search by the datasets. For a single dataset, TISCH2 provides … Gene Exploration. Search a gene across cancer types. For a single gene, TISCH2 … 1. How did TISCH annotate the cell types? The clusters of malignant cells were … Copyright @2024 TISCH project [email protected] … Welcome to TISCH 79 datasets 2,045,746 cells. Tumor Immune Single-cell Hub … Tumor Immune Single-cell Hub (TISCH) is a scRNA-seq database focusing on tumor … jencare atlantaWebscAPAdb provides a comprehensive and manually curated atlas of poly(A) sites, APA events and poly(A) signals at the single-cell level in six species based on a large volume of … jencare humanahttp://tisch.comp-genomics.org/home/ jencare gaWebAug 16, 2024 · TISCH is a scRNA-seq database focusing on tumor microenvironment (TME). TISCH provides detailed cell type annotations at the single-cell levels, enabling the exploration of TME across different cancer types . In this dataset, there are mainly three cell types, including immune cells, stromal cells, and malignant cells. jencare glenwood illinoisWebAug 15, 2024 · TISCH provides interactive gene expression visualization across multiple datasets at the single-cell level or cluster level, allowing systematic comparison between … jencare glenwood illakehead important dates